FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006127172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31640386
Sequences flagged as poor quality0
Sequence length31
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA756160.23898570643227932No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA574920.18170448363050945No Hit
TTCTCAGATGTAAAAAAAAAAAAAAAAAAAA467830.14785849957709113No Hit
CTGAGGCCCAAAAAAAAAAAAAAAAAAAAAA431950.1365185620681113No Hit
TGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA406070.12833914225951606No Hit
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAA378560.1196445580657581No Hit
GACTCAAAAAAAAAAAAAAAAAAAAAAAAAA347460.10981534801756213No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA339730.10737226783516483No Hit
CATTTACGAGACCCGAAAAAAAAAAAAAAAA339700.1073627862820637No Hit
GTGCCACTCAAAAAAAAAAAAAAAAAAAAAA338010.1068286587906987No Hit
GGCTCAAAAAAAAAAAAAAAAAAAAAAAAAA334330.10566558827695717No Hit
TTGCTCGAAAAAAAAAAAAAAAAAAAAAAAA322540.10193933790820378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)