FastQCFastQC Report
Thu 6 Oct 2022
EGAF00006127210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131035752
Sequences flagged as poor quality0
Sequence length35-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTGAACAGGTGGCAAAGGCTTAACAGGCTAGCGGTCACTGTAGTGAC8807600.6721524366876606No Hit
GATCCTAAACATTAACCATCCGTAGTTATTTTTGAGACATGGATTAAAAC7540340.5754414260926285No Hit
GATCAGGGAGCTAAATGACTTGCCAAAAGTCACCCAGTTATTGAGGTCTG7043130.5374968199518556No Hit
GATCTTTCCACTGCACTGTGCCGCCTCGGTGAACAGATGCGGGGAATTTA5722630.4367227960808742No Hit
GATCTGGGAAAGCTATATAACTGCGAAAGCCTTGTCACATCTACAAATTC4199100.3204545275551973No Hit
GATCATCAAATTTAACTTTCTAAATCCTAAGGAGGAAACCGAGACTCCAG3991120.3045825234017049No Hit
GATCTCTGTTCCCTATGGGAGCAGTGAATCACCTGAACTTTGGGTCAATG3529840.2693799170168459No Hit
GATCTGGGACTTGGTTGGGGCCTCGGCCGGTCCAGCTGTCTGGCTGCGCA3518450.2685106885943616No Hit
GATCTTCCAATCCTTTCCTCCACAAAGATAGAAGTTAATTTTGCTGCATC3509970.2678635369681398No Hit
GATCACTCCCTCCGTCTTTTCGCCGCTGTGGGGCCCCAGCCCGAGAGGAG3438820.262433721141998No Hit
GATCTTCTAAAAGGCCGTGACATCACGGCCCAGGTGACCGCGGCCCAGCC3338150.2547510850321216No Hit
GATCTTCAAGGGGTGAAGGGCATCTCGACTGGGGCCACCCCCAAGCTCGC3330370.2541573539410832No Hit
GATCTGTTCTGTTTCACCATGTAACACACAATACATGCATGCATTGTATT3005160.22933893644537562No Hit
GATCGATTTGGGATTTTAAATGGAAATGCACTAAAAATTCCTTAATTCCA2982930.22764245287805115No Hit
GATCCCGAGACTCTCGGCTTGCGCAGGCGCTCTTTGGTGTTTACAGCGGC2737580.20891855529626754No Hit
GATCAAAGGGGATAATGTGTGAGGAAGCATGTTAAAAGCTGAAAGTTTTG2727420.20814319438560552No Hit
GATCATGTCCTGTTCTCGCCAACATCACAAGATGTCCCCAGACACGCCGC2442100.18636898424484946No Hit
GATCCTTTCTTTCCATGGTTTGGCTTCTACTCCAAAGCCACTTATTTGTG2430900.18551425568191496No Hit
GATCTCACAGTAAAACCACAGGAACCAGAGAGCGATATGACATCTCTGCT2417950.18452597578102198No Hit
GATCCCAGGGCTGGGTGGGGCCAGGCTGTCCCATTCCCCAACACTCCTCC2387400.18219455099551762No Hit
GATCTGGCGCTGCCCTAGGGTCAGGGGCCCAGCAATAGTCAGGACCCCAA2300400.17555514162272293No Hit
GATCATGGCTCGGTACAGCGCGGCATTACAGGCCAGGAGATGCCCACCCG2101620.160385235931641No Hit
GATCTTTAAAAAACAACGAATCGCAAAAAGTAACATTTAACAGGCCAGAG2019510.15411900715462754No Hit
GATCCCCCAGAGCAGCCTGAGGCTTCCCACAGGCAGCCAGGCAGCCTCCG1999120.1525629432797852No Hit
GATCCTGAAACTTGTTTTGAGGGGAGAGCAGAGAGGAAAGGGGTTGTTGG1982400.15128695563940445No Hit
GATCGCCTTTAACGTCGGTAACTCTGGAGTGTGAAATCAGTCATCCTTCT1931290.1473864934205132No Hit
GATCTCTTCGGGCCACCGTCGCTGAGCATGCGCAAATAAACGTGGCGGGA1904060.14530843460187873No Hit
GATCAAGCCGGGCACTTTCCACCGTGACATTTATCCTGTACTTTTGAAAA1881740.14360508268003072No Hit
GATCCTTCGACCACACGCGCCGCTCGGTCACCTCAGAGAGCGTGGCGGGG1866740.1424603569261006No Hit
GATCCTGCTAGTTATAGTAAGGGATGAATTTGTTGAGCAGGGCAAGTTTA1863490.14221233301274908No Hit
GATCCCCGGCGGGCCGCTTCTCCCCGCAGGCCGTGTAGCGTCAGATACGG1855140.14157510234306128No Hit
GATCCTGGCTCGCGTCGAGCTCGACGAGGGCCGGAGTTGCGGACGAGACG1798740.13727093350828407No Hit
GATCGCCGGGCCCTCCCGGTTCCCCGGGCCAAGCACACGCCGAACGGGAA1773630.13535466259620504No Hit
GATCTTCTCGTCGTCCGAGTCGGGGTCCAGCGGCTTGTTGTACTCGTCGT1705370.13014539726532037No Hit
GATCGCCGCCGTTGTTGGGCTGTGGAGACGTCTCAACCAAAGTGGAGCCG1689870.12896251398625927No Hit
GATCCCCTGGGAAGGTGGCCACTCACCTGCGCTCTGAAATAGAAGAACAG1686370.12869541131034223No Hit
GATCAGCGAGTCCAGCGCCGGGCGGTCCAGACACGTGAAGTTCTGCAACA1677860.12804597023261255No Hit
GATCTTGGCAGGCCAGTGGGGGAGACACGCAGGAGGCCTGGAAGCCCCTG1651500.12603430550770603No Hit
GATCTGGTAAGGTGGATGGTGGGAGGCTCGAGGGTGTCCAGAGCCTGATG1626210.12410429788657984No Hit
GATCCGGTTGCCTTTCTGCGGTGGAGGAGGAAGTGTTGGATTTCAGCGCT1534590.11711231298157468No Hit
GATCGAAATCCGGAGGAACGGAGTAGTCTGGGAGCGGAGATTATTGACAG1516350.11572032646479566No Hit
GATCGGAATGGTGGAGAACTTCAACCAGGCACTCAAGGTGGGCCATACTC1509170.11517238440391445No Hit
GATCAAGTCCCAGCCTCAACTGCATACACTTTCTAATACAGCCGCGCCCA1457670.11124215931542103No Hit
GATCCTGTTGCGGGGTTCGAGCCGGGGCACGGGAGGCCGACCCGAGGCCG1412900.10782553451519095No Hit
GATCATTTGCAACTAAAAAACAGCGGAGGCTGAAAGACGTAGGTTTCCGG1354080.10333668325877965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)