FastQCFastQC Report
Thu 6 Oct 2022
EGAF00006127211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131035752
Sequences flagged as poor quality0
Sequence length35-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCAGGGAGCTAAATGACTTGCCAAAAGTCACCCAGTTATTGAGGTCTG7566100.5774073017873779No Hit
GATCTGAACAGGTGGCAAAGGCTTAACAGGCTAGCGGTCACTGTAGTGAC7093730.5413583614951132No Hit
GATCTGGGAAAGCTATATAACTGCGAAAGCCTTGTCACATCTACAAATTC6229240.47538476369411No Hit
GATCATCAAATTTAACTTTCTAAATCCTAAGGAGGAAACCGAGACTCCAG5504010.42003879979259395No Hit
GATCATGTCCTGTTCTCGCCAACATCACAAGATGTCCCCAGACACGCCGC5301920.4046162912851448No Hit
GATCTCTGTTCCCTATGGGAGCAGTGAATCACCTGAACTTTGGGTCAATG4913530.3749762889138836No Hit
GATCTTTCCACTGCACTGTGCCGCCTCGGTGAACAGATGCGGGGAATTTA4096010.3125872090236869No Hit
GATCGCCGCCGTTGTTGGGCTGTGGAGACGTCTCAACCAAAGTGGAGCCG4081250.31146079888181966No Hit
GATCTTCCAATCCTTTCCTCCACAAAGATAGAAGTTAATTTTGCTGCATC3997930.30510222889398914No Hit
GATCCTAAACATTAACCATCCGTAGTTATTTTTGAGACATGGATTAAAAC3837510.2928597685309579No Hit
GATCCCCTGGGAAGGTGGCCACTCACCTGCGCTCTGAAATAGAAGAACAG3821010.29160057020163477No Hit
GATCTTCTAAAAGGCCGTGACATCACGGCCCAGGTGACCGCGGCCCAGCC3477090.265354298115525No Hit
GATCTGTTCTGTTTCACCATGTAACACACAATACATGCATGCATTGTATT3432420.2619453048203211No Hit
GATCCCAGACCCCCTATCCTTGCTGGGAGACACAACCCAGAACTCTGCAT3391350.25881104570606045No Hit
GATCTTGGCAGGCCAGTGGGGGAGACACGCAGGAGGCCTGGAAGCCCCTG3332170.2542947210315548No Hit
GATCTGGGACTTGGTTGGGGCCTCGGCCGGTCCAGCTGTCTGGCTGCGCA3105350.2369849413311262No Hit
GATCTTTAAAAAACAACGAATCGCAAAAAGTAACATTTAACAGGCCAGAG3018760.2303768211289389No Hit
GATCTTCAAGGGGTGAAGGGCATCTCGACTGGGGCCACCCCCAAGCTCGC2921440.22294984043744032No Hit
GATCTGGCGCTGCCCTAGGGTCAGGGGCCCAGCAATAGTCAGGACCCCAA2905590.2217402468907875No Hit
GATCGATTTGGGATTTTAAATGGAAATGCACTAAAAATTCCTTAATTCCA2705540.2064734210858728No Hit
GATCAAGCCGGGCACTTTCCACCGTGACATTTATCCTGTACTTTTGAAAA2633810.200999342530579No Hit
GATCGCCGGGCCCTCCCGGTTCCCCGGGCCAAGCACACGCCGAACGGGAA2487990.189871081901373No Hit
GATCTCACAGTAAAACCACAGGAACCAGAGAGCGATATGACATCTCTGCT2479580.1892292723286695No Hit
GATCAAAGGGGATAATGTGTGAGGAAGCATGTTAAAAGCTGAAAGTTTTG2419330.18463129055038352No Hit
GATCGAAATCCGGAGGAACGGAGTAGTCTGGGAGCGGAGATTATTGACAG2379830.18161684606503423No Hit
GATCCTGAAACTTGTTTTGAGGGGAGAGCAGAGAGGAAAGGGGTTGTTGG2186800.16688575191295885No Hit
GATCCGGTTGCCTTTCTGCGGTGGAGGAGGAAGTGTTGGATTTCAGCGCT2148660.16397509589596584No Hit
GATCAGCGAGTCCAGCGCCGGGCGGTCCAGACACGTGAAGTTCTGCAACA2125780.1622290075459711No Hit
GATCACTTCTTTCCACTGAGTCTCTGGGAGGAGACAGGGAGATGCCAGAA2101150.16034936785801787No Hit
GATCGCCTTTAACGTCGGTAACTCTGGAGTGTGAAATCAGTCATCCTTCT2040820.15574528087571093No Hit
GATCCTTCGACCACACGCGCCGCTCGGTCACCTCAGAGAGCGTGGCGGGG1991040.15194631767366817No Hit
GATCATGGCTCGGTACAGCGCGGCATTACAGGCCAGGAGATGCCCACCCG1977310.1508985120335708No Hit
GATCTGGTAAGGTGGATGGTGGGAGGCTCGAGGGTGTCCAGAGCCTGATG1963170.149819417222866No Hit
GATCGGAATGGTGGAGAACTTCAACCAGGCACTCAAGGTGGGCCATACTC1927170.14707207541343373No Hit
GATCATTTGCAACTAAAAAACAGCGGAGGCTGAAAGACGTAGGTTTCCGG1871110.14279385369574557No Hit
GATCAAGTCCCAGCCTCAACTGCATACACTTTCTAATACAGCCGCGCCCA1849160.1411187383424945No Hit
GATCCCCCAGAGCAGCCTGAGGCTTCCCACAGGCAGCCAGGCAGCCTCCG1784090.13615291802194565No Hit
GATCCCCGGCGGGCCGCTTCTCCCCGCAGGCCGTGTAGCGTCAGATACGG1726170.13173275031077014No Hit
GATCACTCCCTCCGTCTTTTCGCCGCTGTGGGGCCCCAGCCCGAGAGGAG1693660.12925174802675227No Hit
GATCTCTTCGGGCCACCGTCGCTGAGCATGCGCAAATAAACGTGGCGGGA1559700.11902858389365369No Hit
GATCCTGTTGCGGGGTTCGAGCCGGGGCACGGGAGGCCGACCCGAGGCCG1483520.11321490336469395No Hit
GATCCGGGTTAGGGGGGCGCAAAACCCCATCCGCCCATTTCCGCACCAAC1477100.11272496074201184No Hit
GATCCCAGGGCTGGGTGGGGCCAGGCTGTCCCATTCCCCAACACTCCTCC1434940.10950751822296559No Hit
GATCCTTTCTTTCCATGGTTTGGCTTCTACTCCAAAGCCACTTATTTGTG1410100.10761185237445732No Hit
GATCCTGCTAGTTATAGTAAGGGATGAATTTGTTGAGCAGGGCAAGTTTA1358840.1036999428980268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)