FastQCFastQC Report
Thu 6 Oct 2022
EGAF00006127213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103133051
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCAGGGAGCTAAATGACTTGCCAAAAGTCACCCAGTTATTGAGGTCTG3867060.3749583632505936No Hit
GATCTGGGAAAGCTATATAACTGCGAAAGCCTTGTCACATCTACAAATTC2824120.2738326824055656No Hit
GATCATCAAATTTAACTTTCTAAATCCTAAGGAGGAAACCGAGACTCCAG2706060.26238533367930716No Hit
GATCATGTCCTGTTCTCGCCAACATCACAAGATGTCCCCAGACACGCCGC2335970.22650062005825852No Hit
GATCGCCGCCGTTGTTGGGCTGTGGAGACGTCTCAACCAAAGTGGAGCCG2274420.22053260113481954No Hit
GATCTGAACAGGTGGCAAAGGCTTAACAGGCTAGCGGTCACTGTAGTGAC2271220.22022232232807695No Hit
GATCTCTGTTCCCTATGGGAGCAGTGAATCACCTGAACTTTGGGTCAATG2167740.21018868141503927No Hit
GATCCTAAACATTAACCATCCGTAGTTATTTTTGAGACATGGATTAAAAC2075510.20124586443195594No Hit
GATCTTTCCACTGCACTGTGCCGCCTCGGTGAACAGATGCGGGGAATTTA1936300.18774776671738336No Hit
GATCTTCCAATCCTTTCCTCCACAAAGATAGAAGTTAATTTTGCTGCATC1919900.1861575878328277No Hit
GATCCCCTGGGAAGGTGGCCACTCACCTGCGCTCTGAAATAGAAGAACAG1901780.18440063408964794No Hit
GATCTTCTAAAAGGCCGTGACATCACGGCCCAGGTGACCGCGGCCCAGCC1667020.1616378051299966No Hit
GATCGATTTGGGATTTTAAATGGAAATGCACTAAAAATTCCTTAATTCCA1390000.13477735667880125No Hit
GATCCCAGACCCCCTATCCTTGCTGGGAGACACAACCCAGAACTCTGCAT1383690.13416552565675574No Hit
GATCTTTAAAAAACAACGAATCGCAAAAAGTAACATTTAACAGGCCAGAG1362760.13213610833640518No Hit
GATCGAAATCCGGAGGAACGGAGTAGTCTGGGAGCGGAGATTATTGACAG1361730.13203623734548492No Hit
GATCTTGGCAGGCCAGTGGGGGAGACACGCAGGAGGCCTGGAAGCCCCTG1296850.12574533453877942No Hit
GATCCGGTTGCCTTTCTGCGGTGGAGGAGGAAGTGTTGGATTTCAGCGCT1247410.12095152697460682No Hit
GATCTTCAAGGGGTGAAGGGCATCTCGACTGGGGCCACCCCCAAGCTCGC1185310.11493017888125893No Hit
GATCAAGCCGGGCACTTTCCACCGTGACATTTATCCTGTACTTTTGAAAA1180280.11444245938191046No Hit
GATCTGGCGCTGCCCTAGGGTCAGGGGCCCAGCAATAGTCAGGACCCCAA1107130.10734967978402966No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)