FastQCFastQC Report
Sat 18 Jun 2022
EGAF00006127355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences894462768
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTAT356002803.98007399230283TruSeq Adapter, Index 7 (97% over 36bp)
GAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTATGCCGT43218840.48318210154947444TruSeq Adapter, Index 7 (96% over 31bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)