FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006128361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences319883
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATCTTCTGCCTCTCCATTTCGTTGCTTTCTATACTTCAGCCCCTCTA12370.38670388860927274No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8640.27009875485724466No Hit
CCAGGTACATCAGATCCATCAGGTCTGAGCTGTGTTGACTACCACTACTT4770.1491170209107705No Hit
CTGGGGAGGAAACACAGGTCAGCATGGGAACAGGGGTCACAGTGGACACA4160.13004754863496965No Hit
TGGATACTCACGACGCGGACCCAGTTCTCACTCCCATTGGGTGTCGGGTT3970.1241078769425071No Hit
GGCAGACAGTGTGACAAAGAGGCTTGGTGTAGGAGAAGAGGGATCAGGAC3790.11848081954964784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)