FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006128527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences344531
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN20780.6031387596471726No Hit
CTCATCTTCTGCCTCTCCATTTCCTTACTTTCTATACATCAGCCCCTCTA5940.17240828836882602No Hit
GGCAGACAGTGTGACAAAGAGGCTGGTGTAGGAGAAGAGGGATCAGGACG3580.10390937245124532No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)