FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006128529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222552
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATCTTCTGCCTCTCCATTTCCTTGCTTTCTATACGTCAGCCTTTCTA4350.19545993745282No Hit
CTCATCTTCTGCCTCTCCATTTCGTTGCTTTCTATACTTCAGCCCCTCTA3940.1770372766814048No Hit
CTCATCTTCTGCCTCTCCATTTCCTTACTTTCTATACGTCAGCCCCTCTA3510.15771594953089615No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2440.1096372982493979No Hit
CCAGGTACATCAGATCCATCAGGTCCGAGCTGTGTTGACTACCACTGCTT2380.10694129911211761No Hit
CCAGGTACATCAGATCCATCAGGTCTGAGCTGTGTTGACTACCACTACTT2360.10604263273302418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)