FastQCFastQC Report
Tue 26 Apr 2022
EGAF00006128655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211171980
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46885202.2202377417685812No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25869751.2250559946447441No Hit
AGAAGAAGGACCCAAAAAAGACCTGTTCTGTCAGTGAATGGATAATCTAAT3429920.16242306389323052No Hit
GAAGAAGGACCCAAAAAAGACCTGTTCTGTCAGTGAATGGATAATCTAATG3146100.14898283380209817No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2677740.12680375492998647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)