FastQCFastQC Report
Mon 13 May 2024
EGAF00006128657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147710771
Total Bases7.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38232962.5883664231906285No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14167710.9591521257444388No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6130440.4150299912793766No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)