Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006128672 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 110903717 |
Sequences flagged as poor quality | 0 |
Sequence length | 28 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCCGCA | 38840 | 0.0 | 19.749868 | 1 |
CGAAGAC | 37005 | 0.0 | 19.620647 | 1 |
AGCGTCG | 28770 | 0.0 | 19.414165 | 2 |
GCCGCAA | 39620 | 0.0 | 19.394241 | 2 |
GCCACGC | 24860 | 0.0 | 19.318388 | 3 |
GGACCCA | 48440 | 0.0 | 19.188345 | 8 |
GAGCCCA | 21875 | 0.0 | 18.857431 | 7 |
TAGCGTC | 34940 | 0.0 | 18.845518 | 1 |
ACGAAGC | 31910 | 0.0 | 18.734245 | 7 |
GGAAGCC | 34575 | 0.0 | 18.619963 | 4 |
AGATCGG | 35165 | 0.0 | 18.604393 | 8 |
CACGAAG | 32290 | 0.0 | 18.561495 | 6 |
CCGAGAG | 32360 | 0.0 | 18.54192 | 3 |
CACGCAC | 25880 | 0.0 | 18.510065 | 5 |
TCGCCCA | 31010 | 0.0 | 18.502735 | 1 |
GGGCCCT | 49430 | 0.0 | 18.414408 | 1 |
AGCGCCC | 19115 | 0.0 | 18.358393 | 8 |
GCGTCGA | 30480 | 0.0 | 18.34338 | 3 |
CCACGCC | 22980 | 0.0 | 18.319378 | 3 |
CAAGCCG | 27240 | 0.0 | 18.247925 | 8 |