FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006128678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006128678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152070169
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGGCCC247300.017.4007263
TATGCCG434350.017.2717865
CCCGATC205850.017.2654822
ACCGTGC304650.017.1869352
CAAGACC249500.017.1282566
GCCACGC207250.017.1170083
CTCTAGA446550.017.1053623
CAACGTA408550.017.0566625
GTCGCCC188450.017.0034484
CGAGGCC243850.016.9928232
CCGAGGC254550.016.9656269
CGAAGCC235950.016.955712
CGCACGG260650.016.8766544
GACCCGG287100.016.8314157
TCCCGTC365200.016.7530121
ACGGGCG379750.016.7136271
ACGCACG264500.016.7017023
CCCGAGC244750.016.656187
CTATGCC463150.016.6134074
AGACCGA255000.016.6078418
Produced by FastQC (version 0.11.5)