EGAF00006130784 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006130784
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33059360
Sequences flagged as poor quality	0
Sequence length	75
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGT	81819	0.2474911795025675	No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTT	49869	0.15084684035020643	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGAGCTTGTTTGGAGGTTCTAGCA	47093	0.14244982359005134	No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCG	42145	0.1274828066847029	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT	34303	0.10376183930965392	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCG	33881	0.10248534756873695	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	4135	39.21344	48
TCGTATG	5025	35.083107	45
GTCACGC	11740	34.264183	29
AGTCACG	12200	33.05714	28
TCACGCA	12180	33.026398	30
CGTCTGA	12650	31.88105	16
CGTATGC	5325	31.810837	46
ATCTCGT	8010	31.657068	42
ATCGCGT	1475	31.342138	42
TCTCGTA	6695	30.196983	43
ACGTCTG	13605	29.668526	15
ACACGTC	14030	28.868158	13
CGCGTAT	945	28.475979	44
ACGCAGA	14415	28.38459	32
CGCAGAA	14445	28.373579	33
CACGTCT	15280	26.59687	14
GATCGGA	15025	26.395088	1
AATCTCG	10730	26.075722	41
CCCTACG	14445	26.008799	24
ATCGGAA	15740	25.688423	2