FastQCFastQC Report
Thu 12 May 2022
EGAF00006130796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440575880
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGCGT13970825831.710373704525086No Hit
CAACCATC12626271428.658562515950713No Hit
TCTATTAG12145146527.566526111234236No Hit
GTGGAGCA4761896110.808344977941143No Hit
TGCTGCGT7704030.17486272739215775No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)