FastQCFastQC Report
Thu 12 May 2022
EGAF00006130799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147317104
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATAGATCGCTCGGA5117120.347354099494109No Hit
CGGACTGGTCCAAGAG3411730.23159089524322987No Hit
TCTCAGCCATGCGTTA3268770.22188665886345416No Hit
CCTAAAGAGACACTTC3089570.2097224229984863No Hit
GTTCAAGTCTGAAAGA3076810.20885626423935133No Hit
GCTGTTCTCTACTTTG3054850.20736560229964882No Hit
ACCGCAGAGGCGTCCT3024070.20527623187596736No Hit
CACAACATCATCGCCT2985450.2026546761331936No Hit
GGTCATATCACATCCC2922030.19834967703410733No Hit
AACCGATCAGGGTACA2891700.19629085296164933No Hit
ACAAGCTCAATGGTAA2790940.18945118551882476No Hit
AGCCTTCAGGTTCTCA2768990.18796120238692718No Hit
TCACCACTCGCATACA2748250.18655335499943035No Hit
TGTTAGGCAAGTAATG2671500.1813435050963261No Hit
ACAGGCCCACATCATG2642520.17937632007753831No Hit
AACGAGGTCGGTCAGC2640890.17926567440532906No Hit
GCAGATTAGAAATCTG2637980.17906814133408433No Hit
CCACGTTAGGCGACTA2604770.17681382061379647No Hit
GTTGGGCGTTCCAATG2600420.17651853921863683No Hit
TCAGTCCAGGTTAGTA2567700.17429748008079227No Hit
ATAGGCTCACGTTACA2543270.17263915261326343No Hit
TTGGTCCGTATCTCAG2508620.17028708356906067No Hit
TTACCCGAGCTACGTT2470030.16766756424970178No Hit
TCCGACTAGAACAGGA2380470.16158816154843772No Hit
ACCCAAAAGGCAGTGT2367450.16070435378637365No Hit
CCCTAGTTCACAGGGA2333350.15838961917144392No Hit
TATTGCTGTGTCCAGC2327330.15798097687285517No Hit
AAAGGATTCGGATGTT2300760.15617738453506388No Hit
AAAGATGTCGGATAAA2266420.15384635853281503No Hit
AACTGGTTCGCGATGC2232340.15153298153349526No Hit
CTCAACCAGTCGTATC2210850.15007422356062605No Hit
ATTGTCTAGGTCGTTT2199800.14932414093614005No Hit
TTGCGAATCCACACCT2198140.1492114588405159No Hit
ATTGTCTGTGGACTGA2179430.1479414094374269No Hit
ACTCGGGGTCATTGGT2161640.14673381035239463No Hit
GGGACCTCACTTGCGG2156680.14639712168113217No Hit
TAGCATGAGTACCTCA2147220.14575496949763553No Hit
CGTAAACCATCCGTAA2103410.14278111250408507No Hit
AATACGCAGGTTCGAG2103400.1427804336962801No Hit
ACTCGGGAGCACGTAG2090070.14187558289226213No Hit
ACCGAATTCTCTATCA2084070.14146829820928328No Hit
GGACACCAGTACGCGA2078910.14111803338192147No Hit
CCGTACTTCCACCTAC2076790.14097412612726895No Hit
TGGGTTACAATGCACT2068650.14042157657402768No Hit
AGCTGATCAGAATGCG2054000.13942712313975436No Hit
GCATGATAGATTACGA2023300.13734318317851266No Hit
GAGCGCTTCCATAACG2018230.13699902762139554No Hit
GCAGCTGTCTTTGCAT2003140.13597470664370379No Hit
CACCTTGAGTCGGGAT2001070.13583419342807607No Hit
GTAATCGTCGCCACTT1990560.13512076642505816No Hit
AAAGGATGTCTGGTTA1977700.13424781958787352No Hit
ATTGTCTGTGCGCATC1955930.1327700549964653No Hit
AGCTATGTCGGGAATG1954480.13267162786474543No Hit
AGCTGTAAGACCAATA1948350.13225551868030205No Hit
CATTCCGAGAAGGGCG1946180.1321082173866247No Hit
GGACACCTCGGTCTAA1944330.13198263794270623No Hit
ACTATTCCAGTAACTC1943490.1319256180870892No Hit
TTGTTGTTCTCGTAGA1939670.13166631350559269No Hit
CACTGAACAGTAAGCG1912460.12981927746828367No Hit
ACTCGGGAGCCTTTGA1898600.12887844985060254No Hit
GTTCAAGCATCCTCGT1890510.1283292943363861No Hit
AACGGGATCTATCTTG1885650.12799939374317323No Hit
TACTAGGAGCCCATGC1869200.12688275490400625No Hit
TTGCGAACAGTAGGCA1866660.12671033772154522No Hit
TCCATCGGTGTCCCAG1857650.126098731889272No Hit
GCGGAAAAGGAGTACC1850930.1256425730443357No Hit
CTAGGATCACAAGGGT1824840.12387156348118275No Hit
ACGTTAGGTCGAGAAC1818000.12340725894258688No Hit
GAGATTCGTTCCAATG1788230.12138644810720689No Hit
ACTCGGGGTAGCGAGT1773000.12035262382024561No Hit
TTGCAGATCAGGGTTT1771740.12026709403682005No Hit
AGGACGACAAGTGGCA1766020.11987881597238025No Hit
CTGGGACCAACTGCGC1765790.11986320339286605No Hit
CAACGGCTCCTCCCAA1759600.11944302136159288No Hit
GTAGACTCAATTGGCT1756530.11923462736546872No Hit
GCACCTTAGACTCTTG1756410.11922648167180913No Hit
CACCTGTAGTTATGAG1755440.11916063731472755No Hit
GATTGACCACCCATCT1739520.11807997528922372No Hit
GCGCCAACAACTCCCT1734390.1177317468852768No Hit
GAAGTGGTCAAGTTGC1729610.11740727675450369No Hit
TCGTTCGAGCGTATCT1726040.11716494236813126No Hit
TCGTTCGGTACCGGCT1715220.11643047232315944No Hit
GCGGAAAGTTGGCTAT1707530.11590846912114157No Hit
CCCTGATCAAGCAATA1707430.11590168104309191No Hit
TGGCCTTTCGCGGCAT1703170.11561250891817694No Hit
GTAGTACAGGGAAATG1699230.11534505864302083No Hit
ACAGCGCTCCTGGAAT1695330.1150803235990846No Hit
GCCAGACTCGCACAAT1694570.11502873420590727No Hit
CGGTGCATCGTGAGTT1676610.11380959538819065No Hit
AATACGCGTCTGGTCG1673950.11362903251207002No Hit
AATGGCTAGGCAGTGT1671380.11345457890619408No Hit
GCGGAAACATACAACC1661250.11276694659976483No Hit
AGGCGAAGTCTCGGGT1635190.11099797346002674No Hit
GGATGAGAGTCCCTCT1632410.11080926489024656No Hit
CTCTAGCTCACTCGGG1630680.11069183113998765No Hit
ATCCTCGAGGGAAATG1621220.11004967895649102No Hit
CCTAAAGCACACACAT1609560.10925818905590215No Hit
CAACGGCGTGAATACA1606500.10905047386758294No Hit
CAGTGCGCACAGGAAC1606460.1090477586363631No Hit
CCGTACTTCAATGCAC1599760.10859295740703673No Hit
GTAATCGGTAACTCCA1597910.10846737796311826No Hit
GCGTAGCCAGTTAAAG1597750.10845651703823882No Hit
ATGTTTCAGAGGAATG1594630.10824472900308982No Hit
CCAGATAGTTGTGACT1591800.10805262639428481No Hit
AACCTTTGTACGCAAG1586450.10768946421862868No Hit
TCGGGACCAACTCGTA1584710.1075713516605648No Hit
TCCCACACATCATAGC1582550.10742472917469244No Hit
TTTGGCCAGTCTGGGA1582140.1073968980546889No Hit
GCGATTAAGTACAACA1579640.1072271961034477No Hit
TTAGCGAGTTTCCGGG1565050.10623681551600417No Hit
AGCGTGCAGGCCAGTA1560820.1059496798145041No Hit
CAATCCCCAATTAGGA1557310.10571141827496147No Hit
CTCTACGTCGGTTGTA1556990.1056896964252026No Hit
ATGTCTTTCCAGCACG1553960.10548401766029829No Hit
CAGTATGAGAACAGGA1551570.10532178259491172No Hit
TCTATTGCAAGGAACC1548810.10513443164074146No Hit
TAGGTGTTCGTAGCGC1547600.10505229589634073No Hit
ATAGTCGCAGATAAGT1537590.10437280928357104No Hit
CCGTACTCATGGGAAC1534370.10415423317037241No Hit
CTCTCGATCCATAACG1524110.10345777636247859No Hit
GCTCGAGTCCATAACG1523600.10342315716442539No Hit
CCACGTTAGAACGCCA1521870.10330572341416648No Hit
GCGTTGGCACTACACA1519220.10312583934585083No Hit
CCCACATGTAGGGTTG1517830.10303148506096073No Hit
TTGCCCAGTGGCGCTT1516430.10293645196826567No Hit
CTTCCAGAGTCCAGAG1515860.1028977599233827No Hit
GTGACATGTATTCTCT1509930.10249522689503861No Hit
ATGCATGTCCCACTAC1507480.10232891898282225No Hit
GCCAGCATCTACCCGT1501450.10191959787642851No Hit
TTGCTTAGTATTGTCG1498700.10173292573006322No Hit
ATTCGTTAGACACTTC1494140.10142338937099932No Hit
TGCCTCATCTTCTCTC1488310.10102764442070489No Hit
GTAATCGTCGTGAACT1486150.1008810219348325No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)