FastQCFastQC Report
Thu 12 May 2022
EGAF00006130801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151724559
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAAAGCATTTAGGC3778910.24906383151853487No Hit
AGTTTGGCATTGCCTC3596640.23705061485794135No Hit
CTTCCAGTCAATTGGC2858070.1883722726786769No Hit
GAACTTGCACCTACCT2753070.18145183733900325No Hit
CATTCCGCATCCCTCA2525200.16643317447375147No Hit
AAACTCGCATGTGAGG2522160.16623281139344093No Hit
ACAAGCTCAATGTGCT2463260.16235077671242398No Hit
AGATTCGAGGGTCCCT2389770.1575071310637324No Hit
GCGAGTCGTGGATTCT2389300.15747615387697386No Hit
CCGTACTCAGTAGTTC2168430.14291885336770035No Hit
CAAAGCTCAAGCGAAC2158930.14229271874172988No Hit
CTGTATTTCTCTGACC2048690.1350269207241525No Hit
CTGTTCGTCAGATACC2028160.1336738108429763No Hit
GTAGACTCAGATTAAG2026400.13355781116490179No Hit
CCGTACTCAAGACACG1903470.12545562910484387No Hit
GTGTCCTGTATCACAC1892220.12471415388987882No Hit
TCACAGACAATGTAAG1883500.12413942821214592No Hit
ACCGGGTAGGTTTCTG1876420.12367279314352793No Hit
CGCACAGGTACGACCC1810040.11929775983069424No Hit
CAACGTAGTCTCGGGT1774570.1169599708640445No Hit
AATGGCTCAGTATACC1761010.11606624607160665No Hit
TTGAGCATCCGTGCAG1760150.11600956441072932No Hit
GCTCGAGTCGATGCAT1749080.11527995279920372No Hit
CTTCTAACACAACGGA1748410.1152357938308458No Hit
TGATTTCAGTTGAATG1707760.11255659672077215No Hit
TCAGGGCCATAGAATG1676360.11048705700966975No Hit
GGCGTTGCACGTACAT1673250.1102820803057994No Hit
AGCGATTAGTCTTAGC1672860.11025637583168063No Hit
TAACTTCAGGTCCTCG1636440.1078559734024338No Hit
GCCCGAATCCCACTAC1614630.1064185001190216No Hit
GAGGTCCTCGAGCGCT1605680.10582861539244941No Hit
GAGACTTAGGGTATCG1605220.10579829729477086No Hit
CCAATGAGTAGAAAGG1583210.10434764222975926No Hit
CCCTCTCGTAGGTCTT1550890.10221746632329973No Hit
CAAGAAACATGTAGAA1539620.10147467293017474No Hit
TGAATCGAGCTTCAAC1524890.10050383471538052No Hit
TGCTCACAGGTTCGAG1518940.10011167671279901No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)