FastQCFastQC Report
Wed 11 May 2022
EGAF00006130804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106967854
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGACCT3270544130.57501836018885No Hit
GAGATGAC3184183829.767670201180252No Hit
ACTTCATA2504952223.417803632855904No Hit
TGCCGTGG1650723115.431954912360869No Hit
TGCCGTGA1160860.10852419269811657No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)