FastQCFastQC Report
Wed 11 May 2022
EGAF00006130810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134133614
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACGGAT3797616428.31219026127187No Hit
GTCGACTC3261687224.316702597754507No Hit
CCTTTAGA3129062123.327948950961687No Hit
TAGACTCG2999758222.363955689734862No Hit
GTCGACTA2038090.15194476158675632No Hit
CGACGGAT1498190.11169385177379923No Hit
TAGACTCA1468360.1094699498665562No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)