FastQCFastQC Report
Sun 15 May 2022
EGAF00006130838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences316200971
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGACCT8828156627.919448103149563No Hit
GAGATGAC7828677924.758551105145088No Hit
ACTTCATA7312443923.125937522816777No Hit
TGCCGTGG7173944922.687928115185958No Hit
TGCCGTGA4164830.13171464928866394No Hit
CTAGACCA3301170.10440100767432495No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)