FastQCFastQC Report
Sun 15 May 2022
EGAF00006130851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006130851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences277831488
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACGT7791457028.043822736175965No Hit
CCTGTGCG7318732626.342343888681185No Hit
TACTCTTC6772897724.377718122432547No Hit
ATGAGAAA5542831119.95033442717623No Hit
AGGAGAAA8273290.29778086204541365No Hit
CCTGTGCA3179930.11445534927992035No Hit
TACTCTTA2787620.10033491956102543No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)