FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences742809929
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG623350.015.07980994
TAAGTCG378350.09.30434894
CAAGTCG484950.05.19476294
Produced by FastQC (version 0.11.5)