FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512901793
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG422000.030.37180194
TAAGTCG293550.014.18565994
CAAGTCG363200.09.75715894
GAAGTCG456750.06.832621694
AAAGTCG477200.06.116303494
Produced by FastQC (version 0.11.5)