FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences710055853
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG597950.016.68718194
TAAGTCG372650.010.22863394
CAAGTCG470450.05.08513194
Produced by FastQC (version 0.11.5)