FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences663497019
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG595800.023.14501694
TAAGTCG380000.013.60526394
CAAGTCG444150.07.8941894
GAAGTCG595750.06.05102894
AAAGTCG632350.05.87918194
Produced by FastQC (version 0.11.5)