FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568196446
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG424200.021.56105694
TAAGTCG308050.011.42769194
CAAGTCG377500.05.440794594
Produced by FastQC (version 0.11.5)