FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006131329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences716080755
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG606100.016.25342294
TAAGTCG362550.09.67094294
ACCGCGC1137500.08.0612751
CCGCGCC1439850.06.41094542
CGCGCCC1145500.05.82217363
CAAGTCG471200.05.66553594
Produced by FastQC (version 0.11.5)