FastQCFastQC Report
Tue 10 May 2022
EGAF00006131340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1055298
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACTTCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCAC21530.20401820149379607No Hit
CCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCTGGGCGAGTATCTC20360.19293128576004123No Hit
CCCGAATCTGGCTTGGCGGAATATCTCTTTGACAAGCACACCCTGGGAGA14320.13569626778407615No Hit
GGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAACTTGCGCAAGA13730.13010542993543056No Hit
GGTGACCACCTGACCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCT12000.11371195624363924No Hit
CCAACTTGCGCAAGATGGGAGCGCCCGAATCTGGCTTGGCGGAATATCTC11050.10470975970768447No Hit
GGAAGTGAAGCTTATCAAGAAGATGGGTGACCACCTGACCAACCTCCACA10860.10290932040049351No Hit
CACTTCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCACCT10830.1026250405098844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)