FastQCFastQC Report
Wed 8 May 2024
EGAF00006131350

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131350
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences895857
Total Bases135.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACTTCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCAC10420.11631320623715616No Hit
CCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCTGGGCGAGTATCTC9070.10124383690700636No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)