FastQCFastQC Report
Thu 9 May 2024
EGAF00006131360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006131360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1800825
Total Bases271.9 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACTTCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCAC26070.14476698180000833No Hit
CCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCTGGGCGAGTATCTC25360.1408243443977066No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)