FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006134973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006134973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14112024
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT886640.6282869133442517No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG578280.40977821466290026No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT319280.22624678075944316No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA205760.14580474069488544No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG185630.13154030917180978No Hit
GGGGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGC181390.12853577913416245No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT164560.11660977900831235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)