EGAF00006135126 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006135126
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12364902
Sequences flagged as poor quality	0
Sequence length	2-151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	37280	0.3014985480677485	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	22371	0.18092339106286487	No Hit
GGGGGTGGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGGCGGCC	19614	0.15862640884658852	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	18706	0.15128304292262082	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	15833	0.12804792144733537	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	12773	0.10330045478726803	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCCGC	13685	48.316353	7
CAGTCCG	14570	45.732742	6
GTCCGCC	16345	40.730045	8
TCCGCCC	16650	40.44875	9
TTTCCGA	21175	37.986507	7
GACAGTC	14765	37.95587	4
ACAGTCC	14795	37.617508	5
TTCCGAC	22470	35.99884	8
GTTTCCG	21005	35.878544	6
TCCGACC	26130	32.063797	9
TACGGCG	2880	31.87464	7
GCACCGT	4790	31.249922	1
GTTAGGT	5990	31.082434	9
GGACAGT	18700	30.243532	3
AGCCTCC	46360	29.90837	145
CGTTTCC	23830	28.769554	5
ACCGGTT	1720	28.73826	3
CCAACGT	2775	27.065264	6
CGTCCGT	1720	26.892586	1
CCGTTTC	23940	26.70751	4