FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006135156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16194197
Sequences flagged as poor quality0
Sequence length2-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG407570.25167657278715333No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG258460.15960038030906998No Hit
GGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGGCGGCCG257360.1589211246473042No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG185710.11467688086047119No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)