FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006135209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5697203
Sequences flagged as poor quality0
Sequence length2-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG146310.25681022775561974No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG135350.23757271770024693No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG123020.21593051888795256No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT64500.11321344877477596No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)