EGAF00006135212 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006135212
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6192186
Sequences flagged as poor quality	0
Sequence length	2-151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15692	0.2534161603026783	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	14424	0.23293873924329794	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	12951	0.2091506941167465	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	6756	0.10910524974540495	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTTCCGA	11540	48.79998	7
TTCCGAC	11755	47.849953	8
AGTCCGC	8270	47.04199	7
GTTTCCG	11470	45.716404	6
AGCCTCC	25940	40.82773	145
CAGTCCG	9980	40.138935	6
GTCCGTT	1200	39.6739	2
TCCGACC	15060	39.29162	9
CGTTTCC	12370	38.48659	5
TCCGCCC	10215	38.352154	9
CCGTTTC	11815	38.279743	4
GTCCGCC	10390	37.574654	8
CGTCCGT	820	37.351627	1
ACCGGTT	1110	35.537437	3
CGCTAGT	300	34.005653	3
GATGGCG	5355	33.91177	8
GACAGTC	9260	33.71187	4
TCCGTTT	9395	33.444622	3
CGGCGTA	1450	33.302086	6
ACAGTCC	9550	32.545727	5