FastQCFastQC Report
Thu 5 Jan 2023
EGAF00006135365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35216640
Sequences flagged as poor quality0
Sequence length32-97
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCAC806790.22909340584450988No Hit
AGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGA541690.15381649129502417No Hit
CTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCAC437560.12424808272453022No Hit
GTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCC358790.10188081543270455No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA353300.10032189328680986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)