FastQCFastQC Report
Thu 5 Jan 2023
EGAF00006135367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32236695
Sequences flagged as poor quality0
Sequence length32-97
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCAC736560.22848496100484247No Hit
AGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGA524460.16269037505240533No Hit
CTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCAC392890.1218766377880859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)