FastQCFastQC Report
Thu 5 Jan 2023
EGAF00006135403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27882203
Sequences flagged as poor quality0
Sequence length32-97
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCAC432910.1552639151217714No Hit
AGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGA399540.14329570730117702No Hit
TCTCGGAGGGGGACGGGCCGCTCGGCGGACGGACGGACGGAATCGCGCCG294740.10570900728324802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)