FastQCFastQC Report
Thu 5 Jan 2023
EGAF00006135491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006135491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34665244
Sequences flagged as poor quality0
Sequence length32-97
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCAC973860.28093268289125556No Hit
AGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGC360290.10393407298676449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)