FastQCFastQC Report
Wed 8 May 2024
EGAF00006138402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33466363
Total Bases870.1 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA460550.1376157905177805No Hit
TTGACTTTTACTTCCTCTAGATAGTC381490.11399207018701137No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)