FastQCFastQC Report
Wed 8 May 2024
EGAF00006138465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24266022
Total Bases630.9 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA323910.1334829417034238No Hit
CGTTCGTTATCGGAATTAACCAGACA304210.1253645941638065No Hit
TGACTTTTACTTCCTCTAGATAGTCA249440.10279393960823081No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)