FastQCFastQC Report
Thu 12 May 2022
EGAF00006138508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90759261
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1320860.1455344595633056No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA1105500.12180575159156486No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC978050.10776310750260516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)