FastQCFastQC Report
Sun 15 May 2022
EGAF00006138547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119540668
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGCATGAAAACTATTTCTTCAAGCGGATTTTCAAGGCTCGTCGGGAG11150500.9327787929041856No Hit
CTGGCATGAAAACTATTTCTTCAAGCGGATTTTCAAGGCTCGTCGGGAGC9073860.7590605065047822No Hit
CTCCCATTTAGAGCTGCATTCCCAAACAACTCGACTCGTCGAAGGGGCTT4985350.4170421734635112No Hit
CTCTGGCCAATATTTAGCTTTAGAAGAAATGTACCTCCCATTTAGAGCTG3772630.3155938529639135No Hit
GACCTGGCATGAAAACTATTTCTTCAAGCGGATTTTCAAGGCTCGTCGGG2087720.17464516761776838No Hit
GGCCAATATTTAGCTTTAGAAGAAATGTACCTCCCATTTAGAGCTGCATT2033460.17010612656104615No Hit
CTGGCCAATATTTAGCTTTAGAAGAAATGTACCTCCCATTTAGAGCTGCA1867870.1562539369447057No Hit
GTGCGCTATCGGTCTCTGGCCAATATTTAGCTTTAGAAGAAATGTACCTC1584730.1325682737526613No Hit
ACCTGGCATGAAAACTATTTCTTCAAGCGGATTTTCAAGGCTCGTCGGGA1534370.12835548150023723No Hit
GCCCTTTCAGCCAAAGCCTATAACCCCTTAACCATGTTGTTAGAACTAGA1490240.12466385079929453No Hit
GTCCGAGATTACAGTTCTGTACCTGCTATGATGTTATTTAAACTACATAC1398890.1170220999601575No Hit
CTTCCCTTTCAACAATTTCACGTGCTGTTTGACTCTCTTTCCAAAGTGCT1263780.10571967022971629No Hit
GCGCTATCGGTCTCTGGCCAATATTTAGCTTTAGAAGAAATGTACCTCCC1248490.1044406076097885No Hit
CTCCTTTTTTGTATATTATATGCTTTTCCAGAACATTTTACTCCATTTCT1232600.10311135286612252No Hit
GTACGACCTGGCATGAAAACTATTTCTTCAAGCGGATTTTCAAGGCTCGT1217910.10188248236993287No Hit
GTCTCTGGCCAATATTTAGCTTTAGAAGAAATGTACCTCCCATTTAGAGC1204510.10076152493978033No Hit
GTGCTGTTTGACTCTCTTTCCAAAGTGCTTTTCATCTTTCGATCACTCTA1199190.10031648810930184No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)