FastQCFastQC Report
Sun 15 May 2022
EGAF00006138548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119540668
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTAATTCCGTTTTAATGTCGGCGCTTGCGCCGCGCCCTCGAAAGGGAAA4791090.40079163686788166No Hit
GGGTAATTCCGTTTTAATGTCGGCGCTTGCGCCGCGCCCTCGAAAGGGAA3862230.3230892101088142No Hit
CGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCTCTTTTAGAG3731550.3121573655586398No Hit
CTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCTCT3621260.3029312166801678No Hit
AGATAGGGTAATTCCGTTTTAATGTCGGCGCTTGCGCCGCGCCCTCGAAA3206020.2681949209117687No Hit
CTCAAATTTGAAATCTGGCTCTTTTAGAGTCCGAGTTGTAATTTGCAGAG2796910.23397142134089466No Hit
GTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCTCTTTT2361260.197527756830002No Hit
AGCGGCAACAGCTCAAATTTGAAATCTGGCTCTTTTAGAGTCCGAGTTGT1833330.15336454368817815No Hit
GAAGCGGCAACAGCTCAAATTTGAAATCTGGCTCTTTTAGAGTCCGAGTT1669160.13963114209801805No Hit
GCTCAAATTTGAAATCTGGCTCTTTTAGAGTCCGAGTTGTAATTTGCAGA1600230.13386490361589748No Hit
ATTTGAAATCTGGCTCTTTTAGAGTCCGAGTTGTAATTTGCAGAGGGCGC1582260.13236164950993917No Hit
CAGCGGTCCAAGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCG1474860.12337725936080599No Hit
GATAGGGTAATTCCGTTTTAATGTCGGCGCTTGCGCCGCGCCCTCGAAAG1303500.10904238882118343No Hit
GTAATTCCGTTTTAATGTCGGCGCTTGCGCCGCGCCCTCGAAAGGGAAAC1285470.10753411550285129No Hit
CGAAAGGGAAACCAGTTAAAATTCTGGTATCTGGATATGGATTCTCCGCG1264760.10580165069848865No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)