FastQCFastQC Report
Thu 12 May 2022
EGAF00006138590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109010764
Sequences flagged as poor quality0
Sequence length150
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCACGGGCCGGGGGCGGGACGGGCGCCGCACGCCCCGACCCGTCTCC3758750.34480539921727366No Hit
GGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGGC1934290.17744027553095582No Hit
GGGGGGACGGGTCCGAGGACGCGGCGGCGGAGCCGCCCCGCCCCGACGCG1830730.16794029624450663No Hit
GCGGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCG1810790.1661111190817817No Hit
GCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCG1699360.15588919274063615No Hit
GGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGG1454150.13339508381025567No Hit
CTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCGG1428080.13100357685778627No Hit
GCTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCG1405630.12894414720366515No Hit
CCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCGG1368040.12549586387634162No Hit
GGCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGC1104420.10131293089552147No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)