FastQCFastQC Report
Thu 12 May 2022
EGAF00006138591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109010764
Sequences flagged as poor quality0
Sequence length150
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCACGGGCCGGGGGCGGGACGGGCGCCGCACGCCCCGACCCGTCTCC1382650.1268360984975759No Hit
CGTCGTCCGGCCCCGCCGCGCCGGCTCCCCGTCTTCGGGGCCGGCCGGAT1230210.112852158342822No Hit
GGGGCCTCGGCCCCGGTCGCGGTCCCCCGTCCCGGGCGGGGGCGGGCGCG1121790.10290635152323123No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)