FastQCFastQC Report
Thu 12 May 2022
EGAF00006138594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006138594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109156150
Sequences flagged as poor quality0
Sequence length150
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCACGGGCCGGGGGCGGGACGGGCGCCGCACGCCCCGACCCGTCTCC3420460.3133547674592774No Hit
CTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCGG1474190.13505331582324953No Hit
GGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGGC1421900.1302629306731687No Hit
GCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCG1389430.12728829296379543No Hit
GCGGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCG1280810.1173374106726923No Hit
CCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCGG1257220.1151762864483586No Hit
GCTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCG1244800.1140384669118506No Hit
GGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGG1150580.10540679567756833No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)