Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006139157 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 71275 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-251 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 181 | 0.2539459838653104 | No Hit |
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG | 110 | 0.15433181339880744 | No Hit |
TCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTTCTGCTTG | 95 | 0.13328656611715187 | TruSeq Adapter, Index 12 (96% over 29bp) |
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG | 83 | 0.11645036829182744 | No Hit |
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT | 78 | 0.10943528586460892 | No Hit |