FastQCFastQC Report
Sat 17 Dec 2022
EGAF00006141650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006141650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21292118
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC307760.14454175014434917No Hit
CGGAAGAGCACACGTCTGAACTCCAGTCACACATTAATCTCGTATGCCGT287570.13505936797832888TruSeq Adapter, Index 5 (97% over 35bp)
GGAAGAGCACACGTCTGAACTCCAGTCACACATTAATCTCGTATGCCGTC225680.105992273760647TruSeq Adapter, Index 5 (97% over 34bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)