FastQCFastQC Report
Fri 16 Dec 2022
EGAF00006141814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006141814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222155096
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14279170.6427568062629542No Hit
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3210750.14452740710480932No Hit
CCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2605530.1172842778272347No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)