FastQCFastQC Report
Fri 16 Dec 2022
EGAF00006141992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006141992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences192943702
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12783000.6625248643772783No Hit
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3638680.18858765340783187No Hit
CCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2492340.12917446769006227No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)